PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_020141
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family WRKY
Protein Properties Length: 255aa    MW: 28127.8 Da    PI: 10.6172
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_020141genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY60.53.1e-19191250259
                  --SS-EEEEEEE--TT-SS.-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsef.prsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +D+y+W+KY  K+++gs   + +YY+C s  gC+++k+v ++++d  v+++tY+geHnh+
  DCAR_020141 191 SDEYSWKKYDHKSITGSSLrSGGYYKCNSVtGCSARKHVIKDKNDSMVLIVTYKGEHNHR 250
                  69**************9862668****9887****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.0E-21183252IPR003657WRKY domain
PROSITE profilePS5081121.195185252IPR003657WRKY domain
SuperFamilySSF1182901.57E-16187252IPR003657WRKY domain
SMARTSM007742.6E-17190251IPR003657WRKY domain
PfamPF031062.8E-16192250IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MAVEVDVYRG MNNYINHSIR RTGHARFRRG PADQSTTSTS SYSHDDQAQQ KSFQFKLNAE  60
ECKSAKSSIS SEVLLIAGEE ATVSNGKLGA LIGGGAKRNY SSAKPPLPFS QRKISPNFSG  120
SSAVVPAMKS SYSSAKPPLP STHRKRRREI EQIFGDRLSS HGCHCCKRRK KIEITRRIRI  180
LKGSSSLSIP SDEYSWKKYD HKSITGSSLR SGGYYKCNSV TGCSARKHVI KDKNDSMVLI  240
VTYKGEHNHR SPGI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143147RKRRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.12e-22WRKY DNA-binding protein 7